PDBsum entry 2jhr Go to PDB code:  Tunnel analysis for: 2jhr calculated with MOLE 2.0 PDB id 2jhr Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.40 44.1 -0.46 -0.08 10.2 77 2 3 5 7 2 0 0  PBQ 1780 A 2 1.40 1.65 46.8 -1.21 -0.23 22.4 77 3 6 3 6 3 1 0   3 1.27 2.12 49.7 0.43 0.18 7.5 75 2 3 5 11 3 0 0  PBQ 1780 A 4 1.28 2.09 52.4 -0.25 0.00 16.8 75 3 6 3 10 4 1 0   5 1.62 1.82 15.1 -1.07 -0.27 24.2 64 1 2 0 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.