PDBsum entry 2jei Go to PDB code:  Tunnel analysis for: 2jei calculated with MOLE 2.0 PDB id 2jei Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.79 1.98 20.4 1.63 0.77 12.1 90 2 0 1 5 0 0 0  DT 12 P DC 13 P DC 4 T BZG 5 T DG 6 T DA 7 T 2 1.81 2.02 24.9 1.51 0.58 10.4 93 3 0 0 6 0 0 0  DC 4 T BZG 5 T DG 6 T DA 7 T 3 1.84 2.06 32.1 -1.33 0.00 29.1 94 4 0 2 2 0 0 0  DG 9 P DA 10 P DA 7 T DA 8 T DT 9 T DC 10 T 4 1.83 2.06 48.3 -0.37 0.20 18.2 89 5 1 3 6 1 0 0  DGT 2475 A DT 14 P DC 4 T BZG 5 T DG 6 T DA 7 T 5 1.33 1.33 15.2 -1.69 -0.39 15.2 76 2 1 2 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.