PDBsum entry 2jch Go to PDB code:  Tunnel analysis for: 2jch calculated with MOLE 2.0 PDB id 2jch Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.26 20.5 1.74 0.86 1.2 86 0 0 2 6 3 0 0   2 1.15 1.25 24.3 0.80 0.63 8.7 88 2 1 2 6 2 0 0   3 1.29 1.29 17.5 -0.69 -0.46 2.5 86 0 0 3 1 2 0 0  PL7 1793 A 4 1.40 2.85 19.6 0.54 0.42 8.6 78 2 2 0 6 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.