PDBsum entry 2jbp Go to PDB code:  Tunnel analysis for: 2jbp calculated with MOLE 2.0 PDB id 2jbp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.65 29.6 0.07 0.09 13.9 83 3 3 1 8 1 0 0  P4O 1345 K 2 1.40 1.43 16.2 -2.09 -0.38 21.7 70 2 1 0 0 1 1 0   3 1.23 1.59 29.7 0.60 0.28 12.8 81 2 4 1 9 1 0 0  P4O 1347 H 4 1.31 1.43 17.0 0.35 0.03 16.6 74 2 2 0 4 1 1 0   5 1.92 3.88 15.0 -0.53 0.15 18.3 80 1 2 0 3 2 0 0   6 1.22 1.72 22.1 -0.86 0.00 21.3 87 2 2 2 3 2 0 0   7 1.23 2.27 18.6 0.27 0.02 16.9 74 2 2 0 4 1 1 0   8 1.36 1.36 16.2 0.18 0.25 14.0 71 1 2 1 3 2 0 0   9 1.40 1.58 18.3 0.24 -0.07 9.1 74 1 1 1 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.