PDBsum entry 2j6t Go to PDB code:  Pore analysis for: 2j6t calculated with MOLE 2.0 PDB id 2j6t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.70 2.91 35.1 -1.40 -0.25 22.2 86 6 3 2 3 1 0 0  DTP 1000 A CA 1002 A DC 13 P 6OG 5 T DG 6 T DA 7 T 2 2.15 2.46 35.3 -0.42 -0.10 12.8 87 4 2 2 5 1 0 0  DTP 1000 A DT 4 T 6OG 5 T DG 6 T DA 7 T 3 2.16 2.47 37.1 -0.71 -0.15 17.1 85 5 4 0 5 1 0 0  DTP 1000 A CA 1002 A DC 13 P DT 4 T 6OG 5 T DG 6 T 4 2.18 2.33 38.5 -1.06 -0.63 13.0 82 5 0 1 1 0 0 0  DG 2 P DA 10 P DT 11 P DT 12 P DC 13 P DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T DT 13 T 5 1.65 1.65 46.8 -1.95 -0.51 25.6 83 6 0 0 2 0 0 0  DG 5 P DA 8 T DT 9 T DC 10 T 6 1.92 1.92 48.6 -0.75 -0.05 22.2 89 6 2 1 6 0 0 0  DG 5 P DG 9 P DT 4 T 6OG 5 T DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T 7 2.17 2.29 50.6 -0.60 -0.43 11.6 84 5 2 1 4 1 0 0  DTP 1000 A DG 2 P DA 10 P DT 11 P DT 12 P DC 13 P DT 4 T 6OG 5 T DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T DT 13 T 8 2.08 2.17 52.1 -1.44 -0.61 19.8 87 6 3 1 2 0 0 0  DTP 1000 A CA 1002 A DA 10 P DT 11 P DT 12 P DC 13 P 6OG 5 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T DT 13 T 9 1.90 1.90 51.7 -1.82 -0.26 28.5 88 8 2 2 3 0 0 0  CA 1003 A DG 5 P DG 9 P DT 12 P DC 13 P DT 4 T 6 OG 5 T DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T 10 2.19 2.24 61.9 -1.88 -0.51 22.7 72 7 1 0 1 2 0 0  DG 2 P DG 5 P DA 10 P DT 11 P DT 9 T DC 10 T DC 11 T DT 12 T DT 13 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.