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PDBsum entry 2j25

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 2j25 PDB id
2j25
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 18379.83 14.71 72.68 3 16.46 1 24.39 1 39 23 54 57 34 26 2 SO4 1501[A], SO4 1507[A], SO4 
1508[A], SO4 1509[B], SO4 1511[B]
(22 atoms)
2 1249.17 0.00 63.94 7 11.30 4 10.36 3 7 1 4 5 2 2 0 SO4 1508[B] (5 atoms)
3 1252.12 0.00 64.16 6 10.84 7 9.59 4 7 1 4 4 2 2 0 SO4 1502[A] (5 atoms)
4 1893.38 0.00 59.51 10 8.44 8 6.67 10 8 1 8 12 4 4 0  
5 994.78 0.00 68.85 5 11.26 5 10.66 2 4 3 4 4 3 5 1  
6 922.22 0.00 78.56 1 10.88 6 8.21 7 4 3 5 3 3 7 0 SO4 1503[A] (5 atoms)
7 962.30 0.00 72.54 4 15.21 2 8.91 6 4 3 3 5 3 5 1  
8 902.81 0.00 74.53 2 11.63 3 8.91 5 4 3 4 2 3 6 0 SO4 1515[B] (5 atoms)
9 1099.83 0.00 62.83 8 5.90 10 6.69 9 5 4 9 4 2 7 0 SO4 1510[B] (2 atoms)
10 1092.66 0.00 62.59 9 6.69 9 7.08 8 4 4 9 3 2 6 0 SO4 1504[A] (2 atoms)
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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