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PDBsum entry 2ixp

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Top Page protein ligands metals Protein-protein interface(s) links
Ligand/metal interactions PDB id
2ixp
4 instances of ligand highlighted
SIN-ALA-ALA-PRO-
LYS-NIT
Ligands
SIN-ALA-ALA-PRO-
LYS-NIT
×4
SIN 1(F) to NIT 6(F)
SIN 1(H) to NIT 6(H)
SIN 1(I) to NIT 6(I)
SO4 ×4
SO4 1318(A)
SO4 1320(A)
Metals
_CL ×2
CL 1321(A)
  
Ligand SIN-ALA-ALA-PRO-LYS-NIT

SIN - Succinic acid Formula: C4H6O4
NIT - 4-Nitroaniline [Paranitroaniline] Formula: C6H6N2O2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
SIN 1(F) 8 8 1 1 Complete Chiral checks - OK
ALA 2(F) 6 - - - Residue too small to validate
ALA 3(F) 6 - - - Residue too small to validate
PRO 4(F) 8 8 1 1 Complete Chiral checks - OK
LYS 5(F) 10 10 1 1 Complete Chiral checks - OK
NIT 6(F) 10 10 0 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
SIN 1(F) O3: O4 1
ALA 2(F) - 0
ALA 3(F) - 0
PRO 4(F) - 0
LYS 5(F) O: OXT 1
NIT 6(F) - 0
Additional Information

Jmol
 

LIGPLOT of interactions involving ligand


Jmol


 

SIN 1(F) to NIT 6(F)


(also representing equivalent ligand SIN 1(G) to NIT 6(G) )
  
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