spacer
spacer

PDBsum entry 2iul

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 2iul calculated with MOLE 2.0 PDB id
2iul
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.37 64.4 -0.68 -0.04 15.0 74 6 6 7 7 5 1 1  1627 ACT A,1628 ACT A
2 1.35 65.1 -0.69 -0.10 16.5 81 6 8 8 9 5 1 0  1627 ACT A,1628 ACT A
3 1.38 75.3 -0.28 0.02 14.9 78 9 7 8 11 5 2 0  1627 ACT A,1628 ACT A
4 1.33 84.1 -1.39 -0.18 18.5 75 5 6 6 6 4 4 0  
5 2.08 9.1 -0.92 -0.29 17.4 82 1 1 3 1 0 0 0  
6 2.05 10.8 -1.26 -0.18 23.2 80 2 1 2 1 0 0 0  
7 2.53 9.5 -0.85 -0.13 2.3 70 0 0 2 1 1 2 0  
8 1.51 2.3 -1.44 -0.54 7.9 76 1 0 1 2 1 0 0  
9 1.85 6.1 0.34 -0.02 4.3 98 0 1 1 2 0 0 0  
10 2.07 6.4 -2.46 -0.72 19.4 91 1 1 1 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer