spacer
spacer

PDBsum entry 2isl

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2isl calculated with MOLE 2.0 PDB id
2isl
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.56 33.6 -2.26 -0.48 25.7 75 5 3 1 2 1 1 0  FNR 505 F
2 1.37 1.61 42.7 -1.33 -0.53 15.4 84 4 2 3 5 2 0 0  
3 1.29 1.49 47.8 -1.33 -0.54 13.6 72 5 3 4 4 1 2 0  
4 1.21 1.99 54.1 -1.30 -0.25 22.1 73 6 3 3 4 1 2 0  FNR 502 A OXY 602 B
5 1.22 2.01 60.2 -1.28 -0.33 20.2 72 6 4 1 6 2 2 0  OXY 605 C FNR 503 D
6 1.20 1.33 82.5 -1.33 -0.41 17.7 72 9 5 4 9 1 4 0  OXY 605 C FNR 503 D
7 1.30 1.30 181.9 -2.41 -0.43 28.2 76 10 7 2 3 1 3 0  FNR 506 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer