PDBsum entry 2irf Go to PDB code:  Pore analysis for: 2irf calculated with MOLE 2.0 PDB id 2irf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.98 1.98 29.8 -2.29 -0.65 25.3 88 3 0 1 0 0 0 0  DA 1025 C DA 1026 C DT 1028 C DG 1029 C DA 1032 C DC 1108 D DA 1109 D DC 1110 D 5IU 1111 D DT 1112 D 2 1.79 2.27 34.9 -2.33 -0.44 26.6 69 4 1 0 0 2 2 0  DA 1024 B DA 1025 C DA 1026 C DC 1108 D DC 1110 D DC 1116 E 3 2.02 2.02 39.0 -2.04 -0.61 26.2 82 6 2 0 1 0 0 0  DA 1008 A DG 1009 A 5IU 1010 A DG 1011 A DT 1124 F DT 1125 F DC 1126 F DT 1130 F DT 1131 F 4 1.39 1.52 41.3 -0.70 -0.13 10.8 70 5 2 1 5 4 6 0  DA 1024 B DA 1025 C DA 1026 C DG 1027 C DC 1108 D DC 1110 D 5 1.42 1.44 56.1 -1.00 -0.10 13.4 74 7 3 1 5 4 6 0  DA 1026 C DG 1027 C 6 1.39 1.39 71.1 -1.59 -0.43 18.4 74 6 3 2 3 2 3 0  DA 1001 A DA 1002 A DG 1003 A DT 1131 F 7 1.48 1.66 78.2 -1.63 -0.40 21.0 75 10 3 0 2 2 2 0  DA 1008 A DG 1017 B DA 1018 B DA 1019 B DA 1020 B DG 1021 B DT 1124 E DT 1124 F 8 2.03 2.02 82.5 -1.72 -0.67 20.8 82 8 4 2 1 0 1 0  DT 1004 A DG 1005 A DA 1006 A DA 1007 A DA 1008 A DG 1009 A 5IU 1010 A DG 1011 A DT 1124 F DT 1125 F DC 1126 F DC 1128 F DT 1130 F DT 1131 F DT 1136 F 9 1.31 1.31 96.6 -1.42 -0.42 18.4 75 7 3 0 2 2 2 0  DG 1021 B DG 1029 C DA 1030 C DA 1032 C DC 1108 D DA 1109 D DT 1112 D DT 1113 E 10 1.47 1.61 100.5 -1.22 -0.42 14.6 77 7 3 3 2 2 3 0  DA 1012 A DA 1013 B DA 1014 B DT 1016 B DG 1017 B DA 1018 B DA 1019 B DA 1020 B DG 1021 B DC 1122 E 5IU 1123 E DT 1124 E DT 1130 F DT 1131 F 11 1.48 1.47 106.5 -1.47 -0.29 19.0 75 8 3 0 3 4 3 0  DG 1021 B 5IU 1022 B DG 1023 B DA 1024 B DA 1025 C DA 1026 C DT 1113 E DC 1114 E DT 1117 E 12 1.47 1.46 107.8 -1.22 -0.41 15.4 77 6 3 2 3 2 3 0  DG 1021 B 5IU 1022 B DG 1023 B DA 1024 B DA 1025 C DC 1110 D DT 1113 E DC 1114 E DT 1118 E 13 1.50 1.50 128.0 -1.44 -0.47 17.7 78 12 5 2 2 2 3 0  DT 1004 A DG 1005 A DA 1006 A DA 1007 A DA 1008 A DG 1009 A DG 1017 B DA 1018 B DA 1019 B DA 1020 B DG 1021 B DT 1124 E DT 1124 F DT 1125 F DC 1128 F DT 1136 F 14 1.78 2.33 131.8 -2.09 -0.64 25.4 78 14 4 0 1 1 1 0  DA 1008 A DG 1017 B DA 1018 B DA 1019 B DA 1020 B DG 1029 C DA 1030 C DA 1032 C DC 1108 D DA 1109 D DT 1112 D DT 1113 E DT 1124 E DT 1124 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.