PDBsum entry 2ipe Go to PDB code:  Tunnel analysis for: 2ipe calculated with MOLE 2.0 PDB id 2ipe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 3.11 18.3 0.34 0.20 8.4 64 0 1 0 7 1 1 0   2 1.56 3.11 25.5 -0.23 -0.07 11.3 74 1 4 1 6 1 2 0   3 1.56 3.11 27.9 0.06 0.02 11.6 69 1 2 0 7 2 1 0   4 1.56 1.84 31.3 0.34 -0.05 9.4 70 0 4 2 9 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.