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PDBsum entry 2ik5

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Tunnel analysis for: 2ik5 calculated with MOLE 2.0 PDB id
2ik5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.09 2.07 29.5 2.01 0.57 1.1 81 0 0 3 11 0 1 0  
2 1.15 1.66 37.8 -0.68 -0.09 10.1 88 1 2 7 6 2 1 0  
3 1.14 1.65 38.0 -0.16 0.03 7.5 89 2 1 6 8 1 1 0  
4 1.13 1.66 38.5 -0.20 0.08 7.2 90 1 1 6 8 2 1 0  
5 1.23 1.51 21.3 0.24 0.39 1.8 65 0 0 3 4 4 0 1  
6 1.39 1.56 22.0 1.01 0.64 1.4 62 0 0 2 6 5 0 1  
7 1.52 2.80 22.9 -0.65 -0.09 14.8 74 2 3 2 3 2 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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