 |
PDBsum entry 2ih1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2ih1 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2ih1
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.16 |
1.27 |
15.7 |
-1.80 |
-0.58 |
14.4 |
91 |
|
1 |
2 |
3 |
2 |
0 |
0 |
0 |
|
|
 |
|
2 |
 |
1.33 |
2.60 |
18.7 |
-0.11 |
-0.37 |
5.8 |
88 |
1 |
0 |
3 |
4 |
1 |
0 |
0 |
|
|
3 |
 |
1.34 |
2.60 |
20.5 |
0.12 |
-0.44 |
1.8 |
95 |
0 |
0 |
3 |
3 |
1 |
0 |
0 |
|
 |
4 |
 |
1.10 |
1.16 |
17.5 |
0.14 |
-0.23 |
3.0 |
86 |
1 |
0 |
1 |
4 |
1 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program