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PDBsum entry 2id5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2id5 calculated with MOLE 2.0 PDB id
2id5
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.40 2.42 77.4 -2.21 -0.44 27.6 82 9 5 3 3 2 4 0  
2 1.65 1.62 82.6 -1.44 -0.29 20.8 81 8 5 5 7 2 2 1  
3 2.55 3.17 83.8 -2.42 -0.43 31.2 81 9 6 2 5 2 3 0  
4 1.69 2.40 41.3 -0.33 -0.16 11.9 79 1 4 3 6 1 2 1  
5 2.48 3.77 33.9 -2.57 -0.42 22.3 79 2 2 2 0 1 2 0  
6 1.38 2.01 58.6 -1.64 -0.54 17.6 88 4 2 5 5 0 1 0  
7 1.32 1.84 37.6 -0.99 -0.16 15.8 77 2 4 3 5 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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