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PDBsum entry 2id0

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 2id0 calculated with MOLE 2.0 PDB id
2id0
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.03 2.11 27.2 -1.11 -0.18 19.2 69 3 4 0 2 1 1 0  MSE 182 C
2 1.27 1.29 38.9 -1.80 -0.37 27.6 75 7 6 1 2 2 0 0  
3 2.81 2.82 39.4 -1.89 -0.29 27.6 80 7 2 1 2 3 0 0  
4 3.83 3.89 63.2 -2.00 -0.23 31.2 78 14 5 2 2 4 0 0  MSE 540 A MSE 633 B
5 1.20 1.43 65.6 -0.21 0.18 16.2 78 8 3 3 9 7 0 0  MSE 531 C
6 1.32 1.51 75.4 -0.85 -0.08 20.0 80 8 9 4 5 5 0 0  
7 1.30 1.80 83.5 -1.73 -0.58 21.2 88 5 7 3 3 1 0 0  
8 1.51 1.76 84.7 -1.47 -0.29 21.9 84 7 9 5 6 3 1 0  MSE 531 C
9 3.32 3.28 85.8 -2.58 -0.37 29.7 82 12 5 5 1 5 1 0  MSE 540 A
10 1.41 1.64 86.5 -1.72 -0.31 22.6 81 12 8 6 5 3 1 0  
11 1.55 1.74 89.0 -1.30 -0.19 20.9 88 7 10 5 9 3 0 0  MSE 531 C
12 1.38 1.53 98.8 -1.91 -0.29 27.6 78 16 8 3 4 3 2 0  MSE 540 A
13 3.29 3.30 109.3 -2.28 -0.30 29.8 80 14 8 6 1 7 1 0  MSE 633 B
14 2.83 3.82 118.7 -2.59 -0.39 33.6 78 20 11 3 2 7 2 0  MSE 633 B
15 1.47 1.54 122.3 -1.83 -0.27 28.2 77 18 11 4 5 5 2 0  MSE 633 B
16 2.88 3.90 123.5 -2.29 -0.35 30.5 79 21 10 5 3 7 3 0  MSE 540 A
17 1.21 1.57 123.7 -1.74 -0.22 27.7 76 19 9 3 5 9 2 0  MSE 633 B
18 1.52 1.96 124.8 -2.44 -0.47 29.1 84 13 10 5 2 3 0 0  
19 1.21 1.58 167.4 -1.68 -0.22 24.5 77 20 10 8 6 12 4 0  
20 1.17 1.53 219.6 -1.45 -0.20 24.2 77 25 16 8 11 10 5 0  
21 1.33 2.81 297.7 -1.25 -0.20 22.4 80 32 19 10 23 11 5 0  MSE 531 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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