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PDBsum entry 2ica

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Cell adhesion PDB id
2ica

 

 

 

 

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Contents
Protein chain
179 a.a. *
Ligands
2IC
Waters ×144
* Residue conservation analysis
PDB id:
2ica
Name: Cell adhesion
Title: Cd11a (lfa1) i-domain complexed with bms-587101 aka 5-[(5s, 9r)-9-(4- cyanophenyl)-3-(3,5-dichlorophenyl)-1-methyl-2,4-dioxo-1,3,7- triazaspiro [4.4]non-7-yl]methyl]-3-thiophenecarboxylicacid
Structure: Integrin alpha-l. Chain: a. Fragment: vwfa domain, residues 154-332. Synonym: leukocyte adhesion glycoprotein lfa-1 alpha chain, lfa-1a, leukocyte function-associated molecule 1 alpha chain, cd11a antigen. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: itgal, cd11a. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Other_details: minimal media
Resolution:
1.56Å     R-factor:   0.192     R-free:   0.223
Authors: S.Sheriff,H.Einspahr
Key ref: D.Potin et al. (2006). Discovery and development of 5-[(5S,9R)-9-(4-cyanophenyl)-3-(3,5-dichlorophenyl)-1-methyl-2,4-dioxo-1,3,7-triazaspiro[4.4]non-7-yl-methyl]-3-thiophenecarboxylic acid (BMS-587101)--a small molecule antagonist of leukocyte function associated antigen-1. J Med Chem, 49, 6946-6949. PubMed id: 17125246 DOI: 10.1021/jm0610806
Date:
12-Sep-06     Release date:   19-Dec-06    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P20701  (ITAL_HUMAN) -  Integrin alpha-L from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1170 a.a.
179 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 
DOI no: 10.1021/jm0610806 J Med Chem 49:6946-6949 (2006)
PubMed id: 17125246  
 
 
Discovery and development of 5-[(5S,9R)-9-(4-cyanophenyl)-3-(3,5-dichlorophenyl)-1-methyl-2,4-dioxo-1,3,7-triazaspiro[4.4]non-7-yl-methyl]-3-thiophenecarboxylic acid (BMS-587101)--a small molecule antagonist of leukocyte function associated antigen-1.
D.Potin, M.Launay, F.Monatlik, P.Malabre, M.Fabreguettes, A.Fouquet, M.Maillet, E.Nicolai, L.Dorgeret, F.Chevallier, D.Besse, M.Dufort, F.Caussade, S.Z.Ahmad, D.K.Stetsko, S.Skala, P.M.Davis, P.Balimane, K.Patel, Z.Yang, P.Marathe, J.Postelneck, R.M.Townsend, V.Goldfarb, S.Sheriff, H.Einspahr, K.Kish, M.F.Malley, J.D.DiMarco, J.Z.Gougoutas, P.Kadiyala, D.L.Cheney, R.W.Tejwani, D.K.Murphy, K.W.Mcintyre, X.Yang, S.Chao, L.Leith, Z.Xiao, A.Mathur, B.C.Chen, D.R.Wu, S.C.Traeger, M.McKinnon, J.C.Barrish, J.A.Robl, E.J.Iwanowicz, S.J.Suchard, T.G.Dhar.
 
  ABSTRACT  
 
LFA-1 (leukocyte function-associated antigen-1), is a member of the beta2-integrin family and is expressed on all leukocytes. This letter describes the discovery and preliminary SAR of spirocyclic hydantoin based LFA-1 antagonists that culminated in the identification of analog 8 as a clinical candidate. We also report the first example of the efficacy of a small molecule LFA-1 antagonist in combination with CTLA-4Ig in an animal model of transplant rejection.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20885411 D.Cox, M.Brennan, and N.Moran (2010).
Integrins as therapeutic targets: lessons and opportunities.
  Nat Rev Drug Discov, 9, 804-820.  
18345706 D.G.Woodside, and P.Vanderslice (2008).
Cell adhesion antagonists: therapeutic potential in asthma and chronic obstructive pulmonary disease.
  BioDrugs, 22, 85.  
18412174 P.M.Fischer (2008).
Computational chemistry approaches to drug discovery in signal transduction.
  Biotechnol J, 3, 452-470.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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