 |
PDBsum entry 2ic3
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2ic3 calculated with MOLE 2.0
|
PDB id
|
|
|
|
2ic3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
14 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.29 |
1.34 |
34.7 |
0.79 |
0.17 |
6.4 |
94 |
 |
2 |
0 |
4 |
6 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.41 |
1.71 |
44.0 |
-1.58 |
-0.57 |
17.1 |
86 |
6 |
3 |
4 |
2 |
0 |
0 |
0 |
|
 |
3 |
 |
1.28 |
1.52 |
45.3 |
-0.81 |
-0.48 |
13.6 |
79 |
4 |
2 |
3 |
3 |
0 |
2 |
0 |
|
 |
4 |
 |
1.72 |
2.92 |
50.6 |
-2.53 |
-0.47 |
28.1 |
77 |
6 |
3 |
3 |
0 |
1 |
1 |
0 |
|
 |
5 |
 |
1.34 |
2.17 |
58.4 |
0.23 |
0.22 |
5.9 |
78 |
3 |
0 |
4 |
8 |
4 |
1 |
0 |
|
 |
6 |
 |
1.36 |
1.41 |
70.0 |
-0.17 |
0.20 |
8.8 |
71 |
5 |
2 |
4 |
9 |
7 |
1 |
0 |
|
 |
7 |
 |
1.20 |
1.83 |
86.8 |
0.22 |
0.13 |
4.5 |
77 |
3 |
0 |
5 |
12 |
5 |
1 |
0 |
|
 |
8 |
 |
1.34 |
1.99 |
101.7 |
-1.87 |
-0.36 |
20.1 |
74 |
9 |
6 |
6 |
3 |
6 |
0 |
0 |
|
 |
9 |
 |
1.91 |
2.07 |
113.0 |
-1.71 |
-0.30 |
19.7 |
80 |
12 |
5 |
6 |
4 |
5 |
1 |
0 |
|
 |
10 |
 |
1.35 |
1.47 |
117.6 |
-1.27 |
-0.16 |
20.7 |
75 |
11 |
6 |
4 |
7 |
6 |
1 |
0 |
|
 |
11 |
 |
1.68 |
3.03 |
138.7 |
-1.72 |
-0.30 |
19.6 |
77 |
13 |
7 |
4 |
5 |
5 |
2 |
0 |
|
 |
12 |
 |
1.33 |
1.42 |
160.2 |
-1.39 |
-0.38 |
12.1 |
80 |
11 |
5 |
8 |
8 |
7 |
4 |
0 |
|
 |
13 |
 |
1.34 |
2.17 |
164.8 |
-1.14 |
-0.28 |
13.0 |
77 |
10 |
7 |
6 |
11 |
8 |
4 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |