PDBsum entry 2ial

Pore analysis for: 2ial calculated with

MOLE 2.0

PDB id

2ial

Pores calculated on whole structure

Pores calculated excluding ligands

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17 pores, coloured by radius

17 pores, coloured by radius

17 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.39

1.65

29.5

-1.13

-0.41

12.2

77

3

1

3

2

3

1

0

2

2.35

2.35

31.3

-1.96

-0.33

17.7

74

3

4

3

0

2

2

0

3

1.74

4.16

35.7

-1.71

-0.48

16.0

83

4

5

2

1

1

2

0

4

2.21

2.83

37.3

-1.52

-0.35

12.2

74

2

3

4

2

5

1

0

5

1.98

2.08

39.6

-1.85

-0.29

21.6

85

4

5

9

2

4

0

0

6

2.74

3.51

41.9

-1.86

-0.52

13.6

85

2

4

6

2

3

0

0

7

1.72

4.17

42.4

-1.72

-0.48

18.0

84

5

4

3

2

2

2

0

8

2.50

2.94

46.5

-1.80

-0.40

16.1

77

2

6

3

0

3

1

0

9

2.56

2.74

54.0

-1.07

-0.26

10.2

84

4

4

7

5

3

2

1

10

1.82

2.34

53.8

-1.70

-0.40

15.1

80

4

6

6

1

3

2

1

11

1.83

2.08

55.9

-1.35

-0.23

16.4

85

7

4

6

3

2

2

1

12

1.69

4.20

58.4

-2.52

-0.40

24.2

84

6

7

5

0

2

0

0

13

2.53

2.74

58.8

-1.34

-0.26

14.3

84

4

6

5

3

2

2

1

14

2.63

2.68

59.1

-1.77

-0.16

21.6

79

5

6

6

4

4

0

0

15

2.50

3.19

61.1

-1.51

-0.23

16.0

84

4

5

8

3

4

2

0

16

2.64

2.68

62.3

-1.77

-0.28

19.3

80

5

5

10

6

6

0

0

17

2.51

2.52

72.0

-1.18

-0.22

13.3

82

6

5

5

4

2

4

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.