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PDBsum entry 2i9g

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 2i9g calculated with MOLE 2.0 PDB id
2i9g
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.18 25.2 -0.97 -0.44 16.1 75 2 0 0 3 1 0 0  DG 1 D DT 2 D DC 3 D DG 4 D DG 5 D DA 4 T DC 5 T
2 1.16 1.16 32.0 -1.56 -0.47 22.2 90 5 1 3 4 1 0 0  DG 1 D DT 2 D DG 6 T
3 1.16 1.16 37.0 -1.05 -0.32 14.6 88 3 0 1 3 1 0 0  DG 1 D DT 2 D DT 6 P DG 7 P DG 6 T DG 7 T DC 8 T
BPI 100 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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