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PDBsum entry 2i94

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Top Page protein metals Protein-protein interface(s) links
Protein binding PDB id
2i94
Contents
Protein chains
182 a.a.
16 a.a.
Metals
_CA ×2

References listed in PDB file
Key reference
Title Structural basis for calcium-Induced inhibition of rhodopsin kinase by recoverin.
Authors J.B.Ames, K.Levay, J.N.Wingard, J.D.Lusin, V.Z.Slepak.
Ref. J Biol Chem, 2006, 281, 37237-37245. [DOI no: 10.1074/jbc.M606913200]
PubMed id 17020884
Abstract
Recoverin, a member of the neuronal calcium sensor branch of the EF-hand superfamily, serves as a calcium sensor that regulates rhodopsin kinase (RK) activity in retinal rod cells. We report here the NMR structure of Ca(2+)-bound recoverin bound to a functional N-terminal fragment of rhodopsin kinase (residues 1-25, called RK25). The overall main-chain structure of recoverin in the complex is similar to structures of Ca(2+)-bound recoverin in the absence of target (<1.8A root-mean-square deviation). The first eight residues of recoverin at the N terminus are solvent-exposed, enabling the N-terminal myristoyl group to interact with target membranes, and Ca(2+) is bound at the second and third EF-hands of the protein. RK25 in the complex forms an amphipathic helix (residues 4-16). The hydrophobic face of the RK25 helix (Val-9, Val-10, Ala-11, Ala-14, and Phe-15) interacts with an exposed hydrophobic groove on the surface of recoverin lined by side-chain atoms of Trp-31, Phe-35, Phe-49, Ile-52, Tyr-53, Phe-56, Phe-57, Tyr-86, and Leu-90. Residues of recoverin that contact RK25 are highly conserved, suggesting a similar target binding site structure in all neuronal calcium sensor proteins. Site-specific mutagenesis and deletion analysis confirm that the hydrophobic residues at the interface are necessary and sufficient for binding. The recoverin-RK25 complex exhibits Ca(2+)-induced binding to rhodopsin immobilized on concanavalin-A resin. We propose that Ca(2+)-bound recoverin is bound between rhodopsin and RK in a ternary complex on rod outer segment disk membranes, thereby blocking RK interaction with rhodopsin at high Ca(2+).
Figure 5.
FIGURE 5. Intermolecular interactions between recoverin and RK25. Side-chain atoms in the hydrophobic groove of recoverin (yellow) interact with side-chain atoms from the hydrophobic surface of RK25 helix (magenta).
Figure 7.
FIGURE 7. Schematic model of Ca^2+-induced inhibition of rhodopsin kinase. Myristoylation (red) targets Ca^2+-bound recoverin to the membrane surface, where it interacts with rhodopsin. Recoverin also interacts with the N-terminal helix of rhodopsin kinase (magenta), forming a ternary complex on the membrane surface that blocks phosphorylation of rhodopsin. Light activation leads to a lowering of cytosolic Ca^2+, causing conformational changes in recoverin that sequester the covalently attached myristoyl group and disrupt the interaction with rhodopsin kinase. Ca^2+-free recoverin then dissociates from the membrane surface, allowing RK to phosphorylate the C-terminal tail of light-excited rhodopsin.
The above figures are reprinted by permission from the ASBMB: J Biol Chem (2006, 281, 37237-37245) copyright 2006.
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