spacer
spacer

PDBsum entry 2i3w

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Membrane protein PDB id
2i3w
Contents
Protein chains
258 a.a.
Ligands
GLU ×2
Waters ×200

References listed in PDB file
Key reference
Title Measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor.
Authors N.Armstrong, J.Jasti, M.Beich-Frandsen, E.Gouaux.
Ref. Cell, 2006, 127, 85-97. [DOI no: 10.1016/j.cell.2006.08.037]
PubMed id 17018279
Abstract
The canonical conformational states occupied by most ligand-gated ion channels, and many cell-surface receptors, are the resting, activated, and desensitized states. While the resting and activated states of multiple receptors are well characterized, elaboration of the structural properties of the desensitized state, a state that is by definition inactive, has proven difficult. Here we use electrical, chemical, and crystallographic experiments on the AMPA-sensitive GluR2 receptor, defining the conformational rearrangements of the agonist binding cores that occur upon desensitization of this ligand-gated ion channel. These studies demonstrate that desensitization involves the rupture of an extensive interface between domain 1 of 2-fold related glutamate-binding core subunits, compensating for the ca. 21 degrees of domain closure induced by glutamate binding. The rupture of the domain 1 interface allows the ion channel to close and thereby provides a simple explanation to the long-standing question of how agonist binding is decoupled from ion channel gating upon receptor desensitization.
Figure 1.
Figure 1. MTSES Modification of E486C in Closed, Open, and Desensitized States
Figure 7.
Figure 7. Mechanism of Activation and Desensitization
The above figures are reprinted by permission from Cell Press: Cell (2006, 127, 85-97) copyright 2006.
Secondary reference #1
Title Probing the ligand binding domain of the glur2 receptor by proteolysis and deletion mutagenesis defines domain boundaries and yields a crystallizable construct.
Authors G.Q.Chen, Y.Sun, R.Jin, E.Gouaux.
Ref. Protein Sci, 1998, 7, 2623-2630. [DOI no: 10.1002/pro.5560071216]
PubMed id 9865957
Full text Abstract
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer