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PDBsum entry 2i1j

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Cell adhesion, membrane protein PDB id
2i1j
Contents
Protein chain
481 a.a.
Ligands
URE ×2
GOL ×3
Metals
_CL
Waters ×411

References listed in PDB file
Key reference
Title Self-Masking in an intact erm-Merlin protein: an active role for the central alpha-Helical domain.
Authors Q.Li, M.R.Nance, R.Kulikauskas, K.Nyberg, R.Fehon, P.A.Karplus, A.Bretscher, J.J.Tesmer.
Ref. J Mol Biol, 2007, 365, 1446-1459. [DOI no: 10.1016/j.jmb.2006.10.075]
PubMed id 17134719
Abstract
Ezrin/radixin/moesin (ERM) family members provide a regulated link between the cortical actin cytoskeleton and the plasma membrane to govern membrane structure and organization. Here, we report the crystal structure of intact insect moesin, revealing that its essential yet previously uncharacterized alpha-helical domain forms extensive interactions with conserved surfaces of the band four-point-one/ezrin/radixin/moesin (FERM) domain. These interdomain contacts provide a functional explanation for how PIP(2) binding and tyrosine phosphorylation of ezrin lead to activation, and provide an understanding of previously enigmatic loss-of-function missense mutations in the tumor suppressor merlin. Sequence conservation and biochemical results indicate that this structure represents a complete model for the closed state of all ERM-merlin proteins, wherein the central alpha-helical domain is an active participant in an extensive set of inhibitory interactions that can be unmasked, in a rheostat-like manner, by coincident regulatory factors that help determine cell polarity and membrane structure.
Figure 2.
Figure 2. Comparison of dormant human and Sfmoesin structures. (a) The human FERM–C-terminal domain complex (PDB code 1EF1). The three lobes of the ERM domain (F1, F2 and F3) are colored cyan and the C-terminal domain is colored red. The β1 strand of the C-terminal domain is contributed by a crystal-packing interaction. (b) The 2.1 Å Sfmoesin structure. The α-helical domain (yellow) folds into three extended helices (αA, αB and αC), each containing elements that pack against the FERM domain. The αB and αC helices form an anti-parallel coiled-coil. (c) In the 3.0 Å structure, 67 more residues of the vert, similar 70 Å αB/αC coiled-coil are revealed. Figure 2. Comparison of dormant human and Sfmoesin structures. (a) The human FERM–C-terminal domain complex (PDB code 1EF1). The three lobes of the ERM domain (F1, F2 and F3) are colored cyan and the C-terminal domain is colored red. The β1 strand of the C-terminal domain is contributed by a crystal-packing interaction. (b) The 2.1 Å Sfmoesin structure. The α-helical domain (yellow) folds into three extended helices (αA, αB and αC), each containing elements that pack against the FERM domain. The αB and αC helices form an anti-parallel coiled-coil. (c) In the 3.0 Å structure, 67 more residues of the [3]not, vert, similar 70 Å αB/αC coiled-coil are revealed.
Figure 4.
Figure 4. Extent and sequence conservation of the surfaces buried by the α-helical domain and linker region. (a) The Sfmoesin FERM domain. The view is rotated by vert, similar 180° around a vertical axis from that in Figure 2. (b) Molecular surface of the FERM domain. Yellow regions are those in contact with the α-helical domain and linker region ( vert, similar 1800 Å^2 of buried accessible surface area). (c) Conservation of the FERM domain. Magenta regions correspond to residues that are either identical or substituted conservatively (e.g. Asp/Glu, Arg/Lys, Ser/Thr) in all ERM-merlin proteins. Green regions correspond to residues conserved only in the ERM family. Figure 4. Extent and sequence conservation of the surfaces buried by the α-helical domain and linker region. (a) The Sfmoesin FERM domain. The view is rotated by [3]not, vert, similar 180° around a vertical axis from that in [4]Figure 2. (b) Molecular surface of the FERM domain. Yellow regions are those in contact with the α-helical domain and linker region ( [5]not, vert, similar 1800 Å^2 of buried accessible surface area). (c) Conservation of the FERM domain. Magenta regions correspond to residues that are either identical or substituted conservatively (e.g. Asp/Glu, Arg/Lys, Ser/Thr) in all ERM-merlin proteins. Green regions correspond to residues conserved only in the ERM family.
The above figures are reprinted from an Open Access publication published by Elsevier: J Mol Biol (2007, 365, 1446-1459) copyright 2007.
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