spacer
spacer

PDBsum entry 2hye

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 2hye calculated with MOLE 2.0 PDB id
2hye
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.11 2.25 35.1 -2.15 -0.79 24.9 87 4 4 3 0 1 0 0  
2 1.76 2.79 40.2 -1.45 -0.41 14.6 85 4 2 5 2 3 0 1  
3 1.67 1.68 46.2 -2.02 -0.80 23.5 85 4 7 3 0 1 1 0  
4 1.47 3.42 46.8 -1.35 -0.49 15.3 86 1 4 5 4 1 1 0  
5 1.80 4.06 50.6 -1.85 -0.51 23.7 75 2 5 3 6 1 1 0  
6 2.09 2.09 53.8 -1.45 -0.34 23.7 78 7 5 1 4 1 2 2  
7 2.54 3.08 57.2 -2.34 -0.45 27.1 83 6 5 3 1 1 0 0  
8 1.77 2.07 67.3 -1.59 -0.45 12.8 88 6 2 5 3 2 1 0  
9 1.65 2.32 69.2 -1.80 -0.49 26.7 81 4 5 6 1 1 2 1  
10 1.81 2.06 72.6 -1.24 -0.52 12.9 83 7 3 5 4 1 3 0  
11 1.17 1.29 82.5 -0.19 -0.17 14.9 81 4 5 5 7 2 2 1  
12 1.28 1.34 84.8 -1.14 -0.32 20.2 78 6 7 6 8 3 1 3  
13 2.35 2.35 87.6 -1.39 -0.44 18.4 80 8 6 5 3 2 3 0  
14 1.48 3.41 89.6 -1.39 -0.35 21.0 81 5 7 7 8 1 1 0  
15 1.83 2.11 98.4 -1.97 -0.45 22.8 83 9 5 5 2 3 1 0  
16 1.66 2.81 102.5 -1.52 -0.42 21.2 80 9 9 8 8 2 2 0  
17 1.88 2.72 110.4 -1.43 -0.46 19.8 89 7 7 11 7 0 1 0  
18 1.51 2.40 134.3 -0.99 -0.27 15.8 76 12 8 9 14 6 3 5  
19 1.84 2.94 137.0 -1.57 -0.47 17.7 91 8 4 15 5 2 2 0  
20 1.23 1.42 109.5 -1.30 -0.40 17.3 84 6 5 6 4 0 1 1  
21 1.62 1.62 167.9 -1.80 -0.51 23.9 84 18 8 8 11 3 1 0  
22 1.62 1.62 189.5 -1.97 -0.46 25.9 84 16 8 7 10 2 1 0  
23 1.27 1.43 203.3 -1.59 -0.49 20.9 86 16 8 11 9 2 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer