spacer
spacer

PDBsum entry 2hox

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2hox calculated with MOLE 2.0 PDB id
2hox
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
11 tunnels, coloured by tunnel radius 24 tunnels, coloured by tunnel radius 24 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.37 28.9 -1.43 -0.53 21.2 78 3 3 2 1 2 0 0  
2 1.37 35.3 -1.69 -0.54 24.7 78 5 3 3 2 2 0 0  
3 1.36 37.8 -1.15 -0.28 14.6 82 5 4 5 2 4 0 0  501 FUC A,505 BMA A
4 1.37 43.8 -1.35 -0.34 18.1 83 7 6 5 2 3 0 0  501 FUC A,502 NAG A,503 BMA A,504 XYP A,505 BMA A
5 1.36 45.1 -1.23 -0.26 13.7 80 7 3 6 4 4 0 1  
6 1.36 46.9 -1.18 -0.27 12.2 80 6 3 4 4 4 1 1  
7 1.35 56.3 -1.44 -0.32 15.8 82 7 3 8 2 4 0 1  
8 1.35 59.4 -1.09 -0.29 15.6 79 9 4 4 3 6 0 0  
9 1.34 63.8 -1.27 -0.30 17.8 77 10 6 4 3 6 0 0  
10 1.34 19.7 -0.58 -0.14 7.2 63 1 1 1 2 3 4 0  
11 1.40 21.5 -0.96 -0.22 15.8 80 4 3 2 2 3 0 0  
12 1.38 31.8 -1.83 -0.57 25.4 77 6 3 3 1 2 0 0  
13 1.84 8.4 -0.81 -0.09 9.1 85 1 0 3 1 2 0 0  500 NAG B
14 1.51 15.6 -1.46 -0.53 19.3 88 2 1 1 3 1 0 0  
15 1.46 17.1 -2.03 -0.53 18.7 77 3 2 2 0 2 0 0  500 NAG B,501 FUC B
16 1.51 11.0 -0.90 -0.17 27.4 82 2 1 0 4 0 1 0  
17 1.37 19.4 -0.54 -0.14 6.9 63 1 1 1 2 3 4 0  
18 1.60 11.1 -1.83 -0.21 10.9 68 1 0 2 0 2 0 0  
19 1.59 12.0 -1.91 -0.20 12.1 68 1 0 2 0 2 0 0  
20 1.80 7.0 -2.97 -0.37 14.6 86 1 1 3 0 1 0 0  500 NAG D
21 1.77 9.6 -0.92 -0.03 8.9 88 1 0 4 1 2 0 0  500 NAG D
22 1.81 10.3 -1.96 -0.21 11.3 64 1 0 2 0 2 0 1  
23 1.36 11.9 -0.79 0.32 13.5 75 2 1 1 3 3 0 0  
24 1.44 6.9 -3.06 -0.83 41.1 74 2 2 0 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer