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PDBsum entry 2hhs

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 2hhs calculated with MOLE 2.0 PDB id
2hhs
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 1.63 27.6 -2.33 -0.61 28.3 87 6 4 2 3 0 0 0  SO4 910 A MG 920 A DG 34 B
2 1.62 1.62 33.8 -2.03 -0.52 24.4 84 5 2 3 2 1 0 0  DG 34 B
3 1.25 1.28 22.1 2.21 0.69 3.9 88 0 2 1 7 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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