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PDBsum entry 2han

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 2han calculated with MOLE 2.0 PDB id
2han
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.28 44.6 -1.13 -0.74 8.4 76 3 0 2 0 1 0 0  DA 11 C DT 12 C DG 13 C DC 14 C DA 15 C DC 16 C
DC 3 D DT 7 D DG 8 D DC 9 D DT 11 D DT 12 D DG 13
D DA 14 D DA 15 D
2 1.93 1.93 55.6 -1.36 -0.62 12.4 65 3 0 1 0 2 0 1  DA 2 C DA 3 C DG 4 C DA 11 C DT 12 C DT 7 D DG 8
D DC 9 D DA 15 D DC 16 D
3 1.91 1.91 78.0 -1.07 -0.75 8.8 71 3 0 2 0 1 0 1  DA 2 C DA 3 C DG 4 C DA 11 C DT 12 C DG 13 C DC
14 C DA 15 C DC 16 C DC 3 D DT 11 D DT 12 D DG 13
D DA 14 D DA 15 D DC 16 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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