PDBsum entry 2gz9 Go to PDB code:  Tunnel analysis for: 2gz9 calculated with MOLE 2.0 PDB id 2gz9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 2.52 15.3 -0.38 -0.33 2.5 74 0 0 2 3 1 1 0   2 1.29 1.42 16.4 -0.75 -0.14 11.9 89 1 2 2 2 0 0 0   3 1.29 2.53 16.8 -0.40 -0.18 4.0 78 0 1 3 2 1 0 0   4 1.24 2.50 18.4 0.15 0.00 3.3 80 0 1 3 3 1 0 0   5 1.29 1.42 23.9 -0.73 -0.15 9.0 94 1 1 2 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.