PDBsum entry 2gpy Go to PDB code:  Tunnel analysis for: 2gpy calculated with MOLE 2.0 PDB id 2gpy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 31.5 0.55 0.01 9.6 82 2 3 2 8 1 0 0  MSE 38 A MSE 43 A MSE 72 A 2 1.59 1.90 17.5 0.44 0.07 8.0 63 0 1 0 3 2 1 0  MSE 145 B MSE 149 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.