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PDBsum entry 2gli
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Pore analysis for: 2gli calculated with  MOLE 2.0
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PDB id
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2gli
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.16 |
1.37 |
27.0 |
-1.24 |
-0.58 |
9.3 |
87 |
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3 |
0 |
2 |
0 |
1 |
0 |
0 |
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DG 15 C DC 11 D DC 12 D DC 13 D DA 14 D
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2 |
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1.72 |
1.78 |
35.2 |
-1.56 |
-0.44 |
16.5 |
90 |
3 |
2 |
4 |
2 |
1 |
0 |
0 |
DC 4 C DG 5 C DT 6 C DC 7 C DT 8 C DG 15 C DC 11
D DC 12 D DC 13 D DA 14 D DA 15 D
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3 |
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1.16 |
1.37 |
39.0 |
-1.55 |
-0.40 |
16.3 |
86 |
3 |
1 |
4 |
2 |
2 |
0 |
0 |
DC 4 C DG 5 C DT 6 C DC 7 C DT 8 C DC 12 D DC 13
D DA 14 D DA 15 D
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4 |
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1.33 |
1.45 |
41.0 |
-2.10 |
-0.47 |
19.6 |
91 |
3 |
2 |
4 |
1 |
1 |
0 |
0 |
DT 2 C DT 3 C DT 6 C DC 7 C DT 8 C DG 15 C DC 11
D DC 12 D DC 13 D DA 14 D DA 15 D DG 16 D DA 17 D
DC 18 D DG 19 D
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5 |
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1.16 |
1.37 |
44.8 |
-2.03 |
-0.41 |
18.0 |
87 |
3 |
1 |
4 |
1 |
2 |
0 |
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DT 2 C DT 3 C DT 6 C DC 7 C DT 8 C DC 12 D DC 13
D DA 14 D DA 15 D DG 16 D DA 17 D DC 18 D DG 19 D
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6 |
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1.18 |
1.24 |
56.1 |
-2.20 |
-0.56 |
22.5 |
88 |
4 |
1 |
3 |
0 |
1 |
1 |
0 |
DG 10 C DG 11 C DG 12 C DG 15 C DC 9 D DA 10 D DC
11 D DG 16 D DA 17 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program