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PDBsum entry 2gih

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2gih calculated with MOLE 2.0 PDB id
2gih
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.33 98.2 -0.50 -0.32 11.0 77 6 7 4 8 6 0 1  3 DC E,4 DG E,5 DG E,6 DT E,8 DG E,8 DG F,11 DC F,
12 DG F,13 DG F,14 DC F
2 1.63 10.7 -0.84 0.16 7.2 69 1 0 2 1 2 0 0  
3 1.37 15.3 -0.82 -0.20 4.9 75 0 2 3 2 2 0 0  
4 1.28 11.9 -0.83 -0.34 17.6 74 1 3 0 1 2 0 0  
5 1.26 7.4 0.62 0.72 12.7 69 2 0 0 2 1 0 0  
6 1.33 5.9 -1.13 -0.30 15.2 65 1 0 0 1 2 0 0  
7 1.39 9.4 -0.73 0.16 13.8 73 1 0 0 2 2 0 0  
8 1.40 10.0 -0.59 0.10 12.1 69 1 0 0 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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