PDBsum entry 2gcd Go to PDB code:  Pore analysis for: 2gcd calculated with MOLE 2.0 PDB id 2gcd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 2.39 35.8 -1.95 -0.51 20.9 75 6 4 4 2 1 3 0   2 1.46 2.03 39.7 -0.41 -0.11 13.5 78 6 4 2 6 2 0 0  STU 400 A 3 1.67 2.38 46.5 -2.67 -0.55 27.1 76 9 5 4 1 1 3 0   4 1.28 1.60 57.6 -0.93 -0.30 16.1 80 5 5 6 7 3 2 0  STU 500 B 5 1.28 1.58 59.7 -0.71 -0.24 16.0 80 4 4 5 8 4 1 0  STU 500 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.