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PDBsum entry 2fms

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Pore analysis for: 2fms calculated with MOLE 2.0 PDB id
2fms
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.31 2.31 33.6 -1.19 -0.18 17.8 85 4 3 1 1 1 0 0  DUP 338 A DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P DC
8 T
2 2.35 2.35 38.7 -1.05 -0.06 21.1 93 4 2 2 4 1 0 0  DUP 338 A DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P DC
8 T
3 1.93 2.13 70.2 -1.58 -0.51 15.5 86 5 4 5 2 1 1 0  DUP 338 A DG 7 P DC 8 P DG 9 P DC 10 P DC 13 T DA
14 T
4 1.91 2.15 75.2 -1.47 -0.42 17.5 91 5 3 6 5 1 1 0  DUP 338 A DG 7 P DC 8 P DG 9 P DC 10 P DC 13 T DA
14 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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