 |
PDBsum entry 2fm0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2fm0 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2fm0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
8 pores,
coloured by radius
|
8 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.58 |
1.73 |
55.3 |
-1.74 |
-0.61 |
19.6 |
85 |
|
4 |
5 |
5 |
4 |
0 |
2 |
0 |
|
|
 |
|
2 |
 |
1.88 |
1.88 |
62.6 |
-2.20 |
-0.65 |
19.6 |
87 |
5 |
5 |
11 |
3 |
0 |
1 |
0 |
M98 602 B
|
|
3 |
 |
2.25 |
2.34 |
70.5 |
-2.17 |
-0.32 |
35.7 |
84 |
13 |
12 |
2 |
8 |
0 |
2 |
0 |
|
|
4 |
 |
1.90 |
3.30 |
83.9 |
-1.96 |
-0.32 |
28.9 |
83 |
11 |
8 |
8 |
8 |
1 |
1 |
0 |
|
|
5 |
 |
1.26 |
1.70 |
84.0 |
-2.39 |
-0.71 |
23.9 |
88 |
7 |
7 |
14 |
3 |
0 |
0 |
0 |
|
|
6 |
 |
1.88 |
1.88 |
91.5 |
-2.62 |
-0.71 |
24.7 |
90 |
8 |
7 |
16 |
2 |
0 |
0 |
0 |
|
|
7 |
 |
1.66 |
1.77 |
100.6 |
-1.91 |
-0.55 |
21.3 |
86 |
6 |
9 |
9 |
7 |
1 |
2 |
0 |
M98 602 B
|
 |
8 |
 |
3.08 |
4.81 |
151.7 |
-2.66 |
-0.74 |
21.9 |
88 |
11 |
8 |
21 |
2 |
2 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program