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PDBsum entry 2flr

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protein ligands Protein-protein interface(s) links
Hydrolase/blood clotting PDB id
2flr

 

 

 

 

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Contents
Protein chains
96 a.a. *
254 a.a. *
151 a.a. *
Ligands
7NH
Waters ×353
* Residue conservation analysis
PDB id:
2flr
Name: Hydrolase/blood clotting
Title: Novel 5-azaindole factor viia inhibitors
Structure: Coagulation factor vii. Chain: l. Fragment: light chain, residues 61-212. Engineered: yes. Coagulation factor vii. Chain: h. Fragment: heavy chain, residues 213-466. Engineered: yes. Tissue factor.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: f7. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: f3.
Resolution:
2.35Å     R-factor:   0.223     R-free:   0.259
Authors: J.R.Riggs,H.Hu,A.Kolesnikov,Z.Tong,E.M.Leahy,K.E.Wesson,W.D.Shrader, D.Vijaykumar,T.A.Wahl,P.A.Sprengeler,M.J.Green,C.Yu,B.A.Katz, W.B.Young
Key ref: J.R.Riggs et al. (2006). Novel 5-azaindole factor VIIa inhibitors. Bioorg Med Chem Lett, 16, 3197-3200. PubMed id: 16621549 DOI: 10.1016/j.bmcl.2006.03.049
Date:
06-Jan-06     Release date:   23-Jan-07    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P08709  (FA7_HUMAN) -  Coagulation factor VII from Homo sapiens
Seq:
Struc:
466 a.a.
96 a.a.
Protein chain
Pfam   ArchSchema ?
P08709  (FA7_HUMAN) -  Coagulation factor VII from Homo sapiens
Seq:
Struc:
466 a.a.
254 a.a.
Protein chain
Pfam   ArchSchema ?
P13726  (TF_HUMAN) -  Tissue factor from Homo sapiens
Seq:
Struc:
295 a.a.
151 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains L, H: E.C.3.4.21.21  - coagulation factor VIIa.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolyzes one Arg-|-Ile bond in factor X to form factor Xa.

 

 
DOI no: 10.1016/j.bmcl.2006.03.049 Bioorg Med Chem Lett 16:3197-3200 (2006)
PubMed id: 16621549  
 
 
Novel 5-azaindole factor VIIa inhibitors.
J.R.Riggs, H.Hu, A.Kolesnikov, E.M.Leahy, K.E.Wesson, W.D.Shrader, D.Vijaykumar, T.A.Wahl, Z.Tong, P.A.Sprengeler, M.J.Green, C.Yu, B.A.Katz, E.Sanford, M.Nguyen, R.Cabuslay, W.B.Young.
 
  ABSTRACT  
 
The discovery and development of 5-azaindole factor VIIa inhibitors will be described.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20544754 S.Zhang, W.X.Zhang, and Z.Xi (2010).
Efficient one-pot synthesis of N-containing heterocycles by multicomponent coupling of silicon-tethered diynes, nitriles, and isocyanides through intramolecular cyclization of iminoacyl-Zr intermediates.
  Chemistry, 16, 8419-8426.  
20045964 T.Shiraishi, S.Kadono, M.Haramura, H.Kodama, Y.Ono, H.Iikura, T.Esaki, T.Koga, K.Hattori, Y.Watanabe, A.Sakamoto, K.Yoshihashi, T.Kitazawa, K.Esaki, M.Ohta, H.Sato, and T.Kozono (2010).
Design and synthesis of peptidomimetic factor VIIa inhibitors.
  Chem Pharm Bull (Tokyo), 58, 38-44.
PDB code: 2zzu
19882601 S.Zhang, X.Sun, W.X.Zhang, and Z.Xi (2009).
One-pot multicomponent synthesis of azaindoles and pyrroles from one molecule of a silicon-tethered diyne and three or two molecules of organonitriles mediated by zirconocene.
  Chemistry, 15, 12608-12617.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.

 

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