spacer
spacer

PDBsum entry 2flc

Go to PDB code: 
Top Page protein dna_rna metals tunnels links
Tunnel analysis for: 2flc calculated with MOLE 2.0 PDB id
2flc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.25 19.5 -1.64 -0.53 23.8 76 2 2 0 0 1 0 0  DC 7 D DT 8 D DC 11 E DC 12 E DA 13 E
2 1.31 1.47 22.8 1.59 0.47 11.6 85 2 2 0 7 1 0 0  
3 1.31 1.44 24.6 0.85 0.17 12.7 86 2 1 0 7 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer