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PDBsum entry 2fkc
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Tunnel analysis for: 2fkc calculated with  MOLE 2.0
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PDB id
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2fkc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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12 tunnels,
coloured by
tunnel radius
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12 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.10 |
1.10 |
33.9 |
-1.19 |
-0.82 |
10.7 |
88 |
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2 |
2 |
3 |
1 |
0 |
0 |
0 |
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DC 2 C DA 3 C DG 4 C DC 5 C DG 6 C CA 52 C DG 19
D DG 20 D
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2 |
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1.10 |
1.10 |
34.1 |
-0.92 |
-0.68 |
10.8 |
85 |
2 |
2 |
3 |
2 |
1 |
0 |
0 |
DG 4 C DC 5 C DG 6 C CA 52 C DG 19 D DG 20 D
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3 |
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1.39 |
1.40 |
17.9 |
-1.40 |
-0.25 |
25.3 |
78 |
2 |
1 |
0 |
3 |
1 |
0 |
0 |
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4 |
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1.39 |
1.40 |
22.1 |
-2.21 |
-0.42 |
34.0 |
79 |
2 |
3 |
0 |
3 |
1 |
0 |
0 |
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5 |
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1.39 |
1.40 |
24.4 |
-1.42 |
-0.22 |
27.7 |
80 |
3 |
2 |
0 |
4 |
1 |
0 |
0 |
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6 |
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1.65 |
1.66 |
15.7 |
1.41 |
0.05 |
1.8 |
71 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
DG 6 E DT 8 E DG 9 E DG 10 E DG 14 F DC 15 F DG
16 F
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7 |
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1.19 |
1.22 |
39.2 |
-0.22 |
-0.20 |
14.0 |
83 |
2 |
1 |
2 |
2 |
0 |
0 |
0 |
DG 6 E DC 7 E DT 8 E DG 9 E DG 14 F DC 15 F DG 16
F
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8 |
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1.35 |
1.39 |
16.6 |
1.20 |
-0.04 |
1.9 |
71 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
DG 6 C DG 9 C DG 10 C DG 14 D DC 15 D DG 16 D
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9 |
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1.34 |
1.39 |
17.6 |
1.30 |
0.00 |
1.9 |
71 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
DG 6 C DT 8 C DG 9 C DG 14 D DC 15 D DG 16 D
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10 |
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1.34 |
1.39 |
24.9 |
0.30 |
-0.27 |
6.6 |
74 |
1 |
0 |
0 |
2 |
0 |
0 |
0 |
DG 6 C DG 9 C DG 10 C DG 14 D DC 15 D DG 16 D
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11 |
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1.35 |
1.37 |
16.2 |
-1.58 |
-0.69 |
15.9 |
88 |
1 |
2 |
3 |
0 |
1 |
0 |
0 |
DC 12 D DA 13 D
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12 |
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1.36 |
1.40 |
18.1 |
-1.42 |
-0.59 |
17.4 |
88 |
1 |
1 |
2 |
0 |
1 |
0 |
0 |
DC 11 D DC 12 D DA 13 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program