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PDBsum entry 2fjw

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Top Page protein dna_rna tunnels links
Tunnel analysis for: 2fjw calculated with MOLE 2.0 PDB id
2fjw
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 1.64 15.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DA 5 B DA 6 B DT 7 B DG 8 B DT 12 G DC 13 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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