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PDBsum entry 2fjm
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Tunnel analysis for: 2fjm calculated with  MOLE 2.0
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PDB id
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2fjm
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.80 |
2.46 |
16.6 |
-1.48 |
-0.52 |
14.3 |
82 |
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1 |
2 |
2 |
2 |
2 |
0 |
0 |
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2 |
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1.78 |
2.57 |
16.8 |
-1.60 |
-0.65 |
15.3 |
88 |
1 |
2 |
2 |
3 |
1 |
0 |
0 |
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3 |
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2.03 |
2.03 |
19.2 |
-0.94 |
0.24 |
17.9 |
80 |
3 |
2 |
1 |
2 |
2 |
0 |
0 |
073 801 B
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4 |
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1.49 |
1.73 |
24.6 |
-1.85 |
-0.05 |
17.2 |
78 |
3 |
1 |
3 |
3 |
4 |
0 |
0 |
073 800 A
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5 |
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1.62 |
1.62 |
24.7 |
-0.46 |
0.07 |
16.7 |
81 |
2 |
1 |
1 |
3 |
2 |
0 |
0 |
073 801 B
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6 |
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1.49 |
1.99 |
26.4 |
-2.27 |
-0.16 |
20.8 |
77 |
4 |
2 |
3 |
2 |
4 |
0 |
0 |
073 800 A
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7 |
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1.49 |
1.97 |
26.9 |
-3.08 |
-0.46 |
31.7 |
79 |
5 |
3 |
3 |
1 |
2 |
0 |
0 |
CL 799 A 073 800 A
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8 |
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1.91 |
3.35 |
29.8 |
-0.88 |
0.01 |
23.3 |
86 |
5 |
3 |
2 |
4 |
1 |
0 |
0 |
CL 799 B 073 801 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program