PDBsum entry 2fdf Go to PDB code:  Tunnel analysis for: 2fdf calculated with MOLE 2.0 PDB id 2fdf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 2.28 33.2 -0.13 0.19 13.0 81 5 1 5 8 4 0 0  CO 300 A AKG 400 A DT 501 B MA7 502 B DT 503 B 2 1.31 2.36 39.2 -0.61 0.25 16.3 80 6 2 4 6 4 0 0  CO 300 A AKG 400 A DT 501 B MA7 502 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.