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PDBsum entry 2fcw

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2fcw calculated with MOLE 2.0 PDB id
2fcw
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.75 18.0 -1.19 -0.38 25.1 78 2 3 1 3 0 0 0  
2 1.19 1.91 21.5 -1.15 0.01 25.6 73 3 2 0 3 2 1 0  
3 1.18 1.91 23.8 -0.67 0.13 22.9 75 3 2 0 4 2 1 0  
4 1.64 1.64 27.2 -0.83 -0.40 16.0 86 4 2 2 3 0 1 0  MPD 4001 A
5 1.73 1.74 27.3 -0.95 -0.47 15.1 85 4 2 2 3 0 0 0  MPD 4001 A
6 1.57 1.65 39.5 -0.65 -0.45 12.3 82 5 3 3 3 0 1 2  MPD 4001 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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