spacer
spacer

PDBsum entry 2f8e

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2f8e calculated with MOLE 2.0 PDB id
2f8e
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 3.33 32.8 -1.08 0.01 26.4 88 5 2 2 6 2 0 0  
2 1.89 2.04 33.1 -1.91 -0.33 20.7 84 6 2 2 2 1 1 0  U5P 2003 A MG 502 X
3 1.85 3.07 41.8 -1.86 -0.40 23.1 81 8 3 2 2 1 2 0  U5P 2003 A MG 502 X
4 1.28 3.31 49.1 -1.28 -0.16 25.3 84 8 4 1 7 2 2 0  U5P 2003 A MG 502 X

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer