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PDBsum entry 2f5n

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Tunnel analysis for: 2f5n calculated with MOLE 2.0 PDB id
2f5n
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.50 27.3 -1.24 -0.70 16.2 81 2 2 0 1 0 0 0  4 DT B,8 DG C,9 DG C,10 DT C,11 DC C,12 DT C
2 1.50 27.5 -1.51 -0.62 18.1 73 2 0 0 1 0 0 0  5 DA B,6 DG B,8 DG C,9 DG C,10 DT C
3 1.50 32.7 -1.60 -0.66 19.7 81 4 1 0 1 0 0 0  1 DA B,3 DG B,4 DT B,8 DG C,9 DG C,10 DT C
4 1.49 35.9 -1.11 -0.59 14.8 79 2 0 0 2 0 0 0  5 DA B,6 DG B,7 DA B,5 DC C,6 DC C,8 DG C,9 DG C,
10 DT C
5 1.50 36.1 -1.25 -0.65 14.9 73 2 0 0 1 0 0 0  5 DA B,6 DG B,7 DA B,8 DC B,5 DC C,6 DC C,7 DA C,
8 DG C,9 DG C,10 DT C
6 1.31 7.4 -2.00 -0.31 30.1 67 2 1 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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