spacer
spacer

PDBsum entry 2f57

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2f57 calculated with MOLE 2.0 PDB id
2f57
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.28 25.8 -0.67 -0.33 17.2 85 1 2 1 3 1 0 0  
2 1.18 2.77 48.0 -0.57 -0.30 15.9 87 4 4 4 7 2 0 0  23D 1 B
3 2.39 3.43 52.1 -2.77 -0.53 28.0 80 7 5 6 2 1 1 0  
4 1.76 2.14 56.3 -0.52 -0.18 16.4 82 5 3 3 7 1 0 0  SEP 602 A TRS 801 A TRS 802 A
5 1.21 1.36 60.3 -1.60 -0.53 13.4 86 3 3 6 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer