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Ligand clusters for UniProt code Q9Y3R4

Ligand clusters for Q9Y3R4: Sialidase-2 OS=Homo sapiens GN=NEU2 PE=1 SV=2

5 ligand clusters
Cluster 1.
9 ligand types
15 ligands
Cluster 2.
2 ligand types
10 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
4 ligands
Representative protein: 2f25A  
 

Structures

PDB   Schematic diagram
2f25A    
1vcuA    
2f29A    
2f27A    
2f28A    
 more ...

 

 Cluster 1 contains 9 ligand types

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Ligand Description


 
1. Ligand: ZMR × 1
zanamivir
Zanamivir
PDB code: 2f0z(A).


 
2. Ligand: DAN × 4
2-Deoxy-2,3-Dehydro-N-Acetyl-Neuraminic acid
PDB codes: 1vcu(A), 2f25(A), 2f27(A), 2f29(A).


 
3. Ligand: EPE × 4
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 1vcu(A), 2f25(A), 2f27(A), 2f29(A).


 
4. Ligand: BCZ × 1
3-(1-Acetylamino-2-Ethyl-Butyl)-4-Guanidino-2-Hydroxy- Cyclopentanecarboxylic acid
PDB code: 2f10(A).


 
5. Ligand: DYM × 1
6-(2,3-Dihydroxypropoxy)-5-Acetamido-5,6-Dihydro-4- Hydroxy-4h-Pyran-2-Carboxylic acid
PDB code: 2f13(A).


 
6. Ligand: FSI × 1
5-(Acetylamino)-3,5-Dideoxy-3-Fluoro-D-Erythro-Alpha-L- Manno-Non-2-Ulopyranosonic acid
PDB code: 4nc5(A).


 
7. Ligand: FSR × 1
(2s,3s,4r,5r,6r)-5-Acetamido-2,3-Bis(fluoranyl)-4- Oxidanyl-6-[(1s,2s)-1,2,3-
Tris(oxidanyl)propyl]oxane- 2-Carboxylic acid
PDB code: 4ncs(A).


 
8. Ligand: HTM × 1
6-(3-Hydroxypropoxy)-5-Acetamido-5,6-Dihydro-4- Hydroxy-4h-Pyran-2-Carboxylic acid
PDB code: 2f12(A).


 
9. Ligand: IEM × 1
5-Acetamido-5,6-Dihydro-4-Hydroxy-6-Isobutoxy-4h- Pyran-2-Carboxylic acid
PDB code: 2f11(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 6
Phosphate ion
PDB codes: 2f10(A), 2f11(A), 2f12(A), 2f13(A), 4nc5(A), 4ncs(A).


 
2. Ligand: EPE × 4
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 1vcu(A), 2f25(A), 2f27(A), 2f29(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 2
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB codes: 2f25(A), 2f29(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 4nc5(A), 4ncs(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 4
PDB codes: 1so7(A), 2f24(A), 2f26(A), 2f28(A).

 

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