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PDBsum entry 2f25

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 2f25 PDB id
2f25
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6415.88 1.35 64.64 5 10.90 3 11.09 2 17 13 29 27 9 20 0 DAN 1002[B], EPE 1004[B], EPE 
1006[B] (50 atoms)
2 4769.30 0.00 64.53 6 9.28 5 10.90 3 16 12 24 23 12 12 1 DAN 1001[A], EPE 1003[A], EPE 
1005[A] (49 atoms)
3 1961.30 0.00 71.95 3 10.03 4 8.92 7 5 2 9 13 4 8 1  
4 1639.83 0.00 73.79 2 11.38 2 9.77 4 3 2 9 11 4 6 1  
5 1411.17 0.00 84.27 1 13.81 1 12.40 1 4 7 12 11 2 3 2  
6 777.52 0.00 61.08 7 8.01 8 9.06 6 5 3 3 3 0 2 0  
7 1245.38 0.00 66.61 4 6.41 9 7.60 10 3 5 10 5 3 3 0  
8 553.08 0.00 57.81 9 9.04 6 9.46 5 5 1 0 1 2 1 0  
9 545.48 0.00 58.21 8 8.30 7 8.72 8 5 1 0 1 2 2 0  
10 564.47 0.00 57.72 10 6.12 10 7.85 9 3 1 8 1 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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