 |
PDBsum entry 2emt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2emt calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2emt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
9 pores,
coloured by radius |
|
9 pores,
coloured by radius
|
9 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.63 |
1.90 |
25.3 |
-2.50 |
-0.75 |
30.0 |
81 |
|
2 |
2 |
2 |
0 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.80 |
2.76 |
28.3 |
-2.79 |
-0.38 |
35.6 |
75 |
8 |
1 |
1 |
3 |
2 |
0 |
0 |
|
|
3 |
 |
1.79 |
2.79 |
34.6 |
-2.73 |
-0.20 |
34.8 |
81 |
8 |
0 |
2 |
2 |
1 |
0 |
0 |
|
|
4 |
 |
2.09 |
2.36 |
35.7 |
-3.68 |
-0.48 |
47.3 |
82 |
10 |
2 |
2 |
1 |
0 |
0 |
0 |
|
|
5 |
 |
1.49 |
4.30 |
42.5 |
-1.39 |
-0.15 |
21.8 |
71 |
5 |
1 |
1 |
4 |
3 |
0 |
0 |
|
|
6 |
 |
1.32 |
2.47 |
42.9 |
-1.69 |
-0.22 |
30.6 |
79 |
5 |
5 |
1 |
4 |
1 |
0 |
0 |
|
|
7 |
 |
2.54 |
3.53 |
47.5 |
-2.21 |
-0.32 |
30.4 |
78 |
10 |
3 |
2 |
5 |
1 |
0 |
0 |
|
|
8 |
 |
1.56 |
1.64 |
66.1 |
-2.06 |
-0.31 |
29.4 |
82 |
9 |
2 |
3 |
4 |
1 |
0 |
0 |
|
 |
9 |
 |
1.57 |
1.72 |
85.2 |
-2.51 |
-0.59 |
30.1 |
81 |
6 |
5 |
5 |
3 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program