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PDBsum entry 2e43

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 2e43 calculated with MOLE 2.0 PDB id
2e43
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 1.50 29.7 -2.07 -0.38 26.2 87 5 0 3 4 0 0 0  DT 7 C DG 8 C DC 9 C DG 10 C DC 11 C
2 1.49 1.49 32.9 -2.15 -0.38 27.6 89 6 0 4 2 0 0 0  DG 8 C DC 9 C DG 10 C DC 11 C DT 105 D DT 106 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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