PDBsum entry 2e2j Go to PDB code:  Pore analysis for: 2e2j calculated with MOLE 2.0 PDB id 2e2j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 2.95 36.5 -2.12 -0.58 29.3 79 3 4 2 3 1 1 0   2 1.17 1.38 38.3 -0.23 -0.08 7.4 84 6 0 5 5 3 1 0   3 1.19 1.34 61.2 -1.03 -0.40 15.5 75 5 2 5 4 1 2 2  DA 14 N DG 5 T DA 6 T 4 3.10 4.79 61.6 -1.87 -0.55 24.6 89 7 9 7 7 0 0 0  DA 9 T DG 10 T 5 1.34 1.90 64.6 -1.66 -0.23 27.1 75 6 9 2 2 4 1 0   6 1.16 1.31 68.8 -0.26 -0.17 9.8 78 4 2 5 8 2 0 2  DG 5 T DA 6 T DT 7 T DA 8 T DA 9 T 7 1.58 1.89 70.3 -1.91 -0.32 19.0 86 3 2 5 3 1 3 0  DA 8 T DA 9 T 8 1.21 1.38 103.0 -0.68 -0.31 13.7 81 7 2 3 5 1 0 2  DT 6 N DT 7 N DG 5 T DG 13 T DA 14 T DC 15 T DA 17 T 9 1.21 1.46 125.2 -0.90 -0.35 18.5 83 8 3 2 9 1 1 0   10 1.80 1.80 126.5 -1.98 -0.62 30.1 87 8 8 4 6 0 0 0  DG 13 T DA 14 T DC 15 T DA 17 T 11 1.16 1.22 142.0 -1.72 -0.43 22.4 85 15 9 9 6 2 2 0  DG 25 T DA 26 T DT 27 T 12 1.81 1.79 149.2 -1.68 -0.65 23.2 86 10 9 6 9 1 0 0  DG 4 N DC 5 N DA 8 T DA 9 T DG 13 T DA 14 T DC 15 T 13 1.29 1.28 152.1 -1.36 -0.39 18.8 83 10 6 8 8 3 1 0  A 2 R C 4 R G 5 R A 6 R DA 17 T DC 18 T DC 24 T DG 25 T DA 26 T DT 27 T 14 2.21 2.26 158.4 -1.82 -0.49 23.6 82 15 10 7 6 2 3 0  A 2 R C 4 R G 5 R A 6 R DA 17 T DC 18 T DC 24 T DG 25 T DA 26 T 15 2.36 2.37 180.9 -1.99 -0.53 26.5 86 21 18 12 9 1 2 0  A 2 R C 4 R G 5 R A 6 R DA 17 T DC 18 T DC 24 T DG 25 T DA 26 T 16 1.51 2.16 257.9 -1.36 -0.30 23.8 83 25 20 14 24 3 1 0   17 1.37 2.98 268.3 -1.57 -0.27 23.6 81 20 20 14 18 6 2 0   18 1.20 1.22 293.3 -1.00 -0.16 21.4 80 27 16 12 24 4 4 0  DA 17 T 19 1.24 1.26 319.7 -1.23 -0.26 22.5 80 24 19 13 24 5 2 0  A 2 R C 4 R G 5 R A 6 R DA 17 T DC 18 T DC 24 T DG 25 T DA 26 T DT 27 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.