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PDBsum entry 2dw2

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2dw2 calculated with MOLE 2.0 PDB id
2dw2
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 2.46 27.2 -1.34 -0.44 18.7 86 4 4 3 1 1 1 0  
2 1.51 1.55 28.6 -1.38 -0.44 20.6 73 2 2 1 3 1 0 0  
3 1.32 3.05 33.3 -1.61 -0.31 25.2 86 7 3 3 3 0 1 0  
4 1.96 2.22 35.5 -1.17 -0.31 20.4 87 4 4 4 4 1 1 0  
5 2.53 2.52 38.1 -2.85 -0.62 29.1 81 7 5 3 0 1 0 0  
6 1.97 2.22 41.2 -1.76 -0.50 22.8 85 5 5 4 3 1 1 0  
7 2.53 2.53 42.3 -2.86 -0.66 25.0 85 5 5 6 0 1 0 0  
8 2.81 2.81 44.9 -2.87 -0.68 27.8 85 6 6 5 0 0 0 0  
9 1.96 2.22 48.7 -1.53 -0.39 19.5 89 8 3 7 4 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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