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PDBsum entry 2dre
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Tunnel analysis for: 2dre calculated with  MOLE 2.0
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PDB id
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2dre
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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19 tunnels,
coloured by
tunnel radius
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19 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.89 |
1.91 |
26.3 |
0.95 |
0.44 |
2.0 |
71 |
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1 |
0 |
3 |
6 |
2 |
0 |
0 |
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CLA 1001 A CLA 1001 B
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2 |
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1.38 |
1.74 |
31.3 |
1.11 |
0.64 |
1.9 |
64 |
1 |
0 |
2 |
7 |
2 |
0 |
2 |
CLA 1001 A CLA 1001 B
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3 |
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1.87 |
1.88 |
34.5 |
0.73 |
0.24 |
1.6 |
76 |
0 |
0 |
4 |
6 |
1 |
1 |
0 |
CLA 1001 A CLA 1001 B
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4 |
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2.13 |
2.45 |
35.0 |
1.40 |
1.15 |
1.2 |
59 |
0 |
0 |
2 |
10 |
4 |
0 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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5 |
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2.12 |
2.14 |
35.7 |
0.92 |
0.97 |
1.5 |
62 |
0 |
0 |
2 |
10 |
4 |
0 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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6 |
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2.02 |
2.78 |
36.8 |
0.50 |
0.24 |
1.9 |
77 |
0 |
0 |
3 |
6 |
2 |
1 |
0 |
CLA 1001 A CLA 1001 B
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7 |
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1.38 |
1.74 |
37.4 |
2.02 |
1.19 |
1.0 |
55 |
0 |
0 |
2 |
10 |
4 |
0 |
2 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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8 |
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1.38 |
1.74 |
38.1 |
1.53 |
1.02 |
1.2 |
58 |
0 |
0 |
2 |
10 |
4 |
0 |
2 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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9 |
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1.38 |
1.74 |
39.2 |
1.51 |
0.59 |
1.4 |
65 |
0 |
0 |
3 |
7 |
2 |
1 |
2 |
CLA 1001 A CLA 1001 B
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10 |
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1.89 |
1.90 |
42.3 |
1.13 |
0.90 |
1.5 |
61 |
0 |
0 |
3 |
13 |
4 |
0 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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11 |
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1.89 |
1.91 |
43.0 |
0.80 |
0.78 |
1.6 |
63 |
0 |
0 |
3 |
13 |
4 |
0 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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12 |
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1.51 |
2.19 |
48.3 |
0.34 |
0.63 |
3.7 |
59 |
1 |
1 |
2 |
10 |
5 |
3 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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13 |
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1.38 |
1.75 |
50.6 |
0.86 |
0.69 |
3.4 |
56 |
1 |
1 |
2 |
11 |
5 |
3 |
2 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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14 |
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1.51 |
2.26 |
55.5 |
0.34 |
0.50 |
3.5 |
60 |
1 |
1 |
3 |
14 |
5 |
3 |
0 |
CLA 1001 A CLA 1001 B CLA 1001 C CLA 1001 D
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15 |
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1.18 |
1.18 |
15.9 |
-1.34 |
-0.56 |
12.9 |
81 |
2 |
0 |
3 |
0 |
2 |
0 |
0 |
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16 |
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1.70 |
1.87 |
15.5 |
-1.40 |
-0.45 |
8.4 |
85 |
1 |
1 |
3 |
0 |
2 |
0 |
0 |
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17 |
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1.23 |
1.38 |
16.7 |
0.21 |
-0.34 |
5.7 |
103 |
0 |
1 |
2 |
3 |
0 |
0 |
0 |
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18 |
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1.13 |
1.13 |
16.4 |
-0.34 |
-0.08 |
17.1 |
88 |
1 |
3 |
2 |
2 |
1 |
1 |
0 |
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19 |
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1.39 |
2.60 |
16.7 |
-1.99 |
-0.83 |
10.3 |
97 |
0 |
3 |
3 |
1 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program